Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KDM4BO94953 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDM4BO94953 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
KDM4BO94953 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDM4BO94953 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.1□□□□□ -0.15
KDM4BO94953 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.1□□□□□ -0.15
KDM4BO94953 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
KDM4BO94953 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
KDM4BO94953 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
KDM4BO94953 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
KDM4BO94953 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
KDM4BO94953 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
KDM4BO94953 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
KDM4BO94953 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.09□□□□□ -0.15
KDM4BO94953 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.09□□□□□ -0.15
KDM4BO94953 AC108073.2-201ENST00000464002 357 ntBASIC14.09□□□□□ -0.15
KDM4BO94953 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
KDM4BO94953 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.09□□□□□ -0.15
KDM4BO94953 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.09□□□□□ -0.15
KDM4BO94953 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
KDM4BO94953 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.09□□□□□ -0.15
KDM4BO94953 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
KDM4BO94953 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.09□□□□□ -0.15
KDM4BO94953 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
KDM4BO94953 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
KDM4BO94953 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.09□□□□□ -0.15
KDM4BO94953 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.09□□□□□ -0.15
KDM4BO94953 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.09□□□□□ -0.15
KDM4BO94953 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.09□□□□□ -0.15
KDM4BO94953 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.09□□□□□ -0.15
KDM4BO94953 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.09□□□□□ -0.15
KDM4BO94953 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KDM4BO94953 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
KDM4BO94953 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
KDM4BO94953 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.08□□□□□ -0.15
KDM4BO94953 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
KDM4BO94953 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
KDM4BO94953 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
KDM4BO94953 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.08□□□□□ -0.16
KDM4BO94953 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.08□□□□□ -0.16
KDM4BO94953 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 OR7E47P-204ENST00000575924 449 ntBASIC14.08□□□□□ -0.16
KDM4BO94953 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.08□□□□□ -0.16
KDM4BO94953 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.08□□□□□ -0.16
KDM4BO94953 AC004790.2-201ENST00000623588 572 ntBASIC14.08□□□□□ -0.16
KDM4BO94953 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.08□□□□□ -0.16
KDM4BO94953 AC012569.1-201ENST00000591191 1524 ntBASIC14.08□□□□□ -0.16
KDM4BO94953 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
KDM4BO94953 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
KDM4BO94953 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
KDM4BO94953 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
KDM4BO94953 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.08□□□□□ -0.16
KDM4BO94953 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
KDM4BO94953 AL359258.3-201ENST00000622910 2331 ntBASIC14.08□□□□□ -0.16
KDM4BO94953 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
KDM4BO94953 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.08□□□□□ -0.16
KDM4BO94953 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.08□□□□□ -0.16
KDM4BO94953 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.08□□□□□ -0.16
KDM4BO94953 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.08□□□□□ -0.16
KDM4BO94953 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDM4BO94953 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms