Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 AC139530.3-201ENST00000620344 690 ntBASIC15.3■□□□□ 0.04
PRAMEF4O60810 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF4O60810 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF4O60810 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 DBET-201ENST00000630918 3363 ntBASIC15.29■□□□□ 0.04
PRAMEF4O60810 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 RPL37AP1-201ENST00000412502 279 ntBASIC15.29■□□□□ 0.04
PRAMEF4O60810 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 SPDYE7P-202ENST00000420373 878 ntBASIC15.29■□□□□ 0.04
PRAMEF4O60810 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 AC112693.3-201ENST00000624819 1983 ntBASIC15.29■□□□□ 0.04
PRAMEF4O60810 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF4O60810 TMBIM7P-203ENST00000641617 1718 ntBASIC15.29■□□□□ 0.04
PRAMEF4O60810 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF4O60810 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 FO393414.2-201ENST00000405153 598 ntBASIC15.28■□□□□ 0.04
PRAMEF4O60810 AC074338.1-201ENST00000416825 156 ntBASIC15.28■□□□□ 0.04
PRAMEF4O60810 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PRAMEF4O60810 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF4O60810 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEF4O60810 AC087481.3-201ENST00000602886 1894 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms