Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA2O43364 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA2O43364 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HOXA2O43364 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HOXA2O43364 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA2O43364 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HOXA2O43364 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HOXA2O43364 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 BRWD1P1-201ENST00000401091 371 ntBASIC16.91■□□□□ 0.3
HOXA2O43364 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.91■□□□□ 0.3
HOXA2O43364 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXA2O43364 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXA2O43364 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC16.91■□□□□ 0.3
HOXA2O43364 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXA2O43364 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXA2O43364 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXA2O43364 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
HOXA2O43364 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA2O43364 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.91■□□□□ 0.3
HOXA2O43364 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA2O43364 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXA2O43364 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.91■□□□□ 0.3
HOXA2O43364 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA2O43364 RHOXF1P1-202ENST00000635473 501 ntBASIC16.91■□□□□ 0.3
HOXA2O43364 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA2O43364 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA2O43364 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA2O43364 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA2O43364 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
HOXA2O43364 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA2O43364 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA2O43364 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXA2O43364 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA2O43364 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA2O43364 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HOXA2O43364 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.9■□□□□ 0.3
HOXA2O43364 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HOXA2O43364 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXA2O43364 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HOXA2O43364 AC107373.2-201ENST00000607735 490 ntBASIC16.9■□□□□ 0.3
HOXA2O43364 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HOXA2O43364 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA2O43364 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
HOXA2O43364 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA2O43364 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXA2O43364 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HOXA2O43364 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HOXA2O43364 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA2O43364 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.89■□□□□ 0.3
HOXA2O43364 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HOXA2O43364 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.89■□□□□ 0.3
HOXA2O43364 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HOXA2O43364 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
HOXA2O43364 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HOXA2O43364 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.89■□□□□ 0.29
HOXA2O43364 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA2O43364 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms