Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 AL162274.1-201ENST00000617191 1098 ntBASIC15.91■□□□□ 0.14
MID1O15344 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MID1O15344 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.91■□□□□ 0.14
MID1O15344 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.91■□□□□ 0.14
MID1O15344 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MID1O15344 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MID1O15344 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.91■□□□□ 0.14
MID1O15344 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.91■□□□□ 0.14
MID1O15344 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MID1O15344 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MID1O15344 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.91■□□□□ 0.14
MID1O15344 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
MID1O15344 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MID1O15344 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.91■□□□□ 0.14
MID1O15344 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MID1O15344 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MID1O15344 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.91■□□□□ 0.14
MID1O15344 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MID1O15344 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MID1O15344 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.9■□□□□ 0.14
MID1O15344 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MID1O15344 AC018892.3-201ENST00000623986 2499 ntBASIC15.9■□□□□ 0.14
MID1O15344 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.9■□□□□ 0.14
MID1O15344 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MID1O15344 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MID1O15344 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
MID1O15344 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MID1O15344 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MID1O15344 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MID1O15344 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MID1O15344 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.9■□□□□ 0.14
MID1O15344 MIR648-201ENST00000385046 94 ntBASIC15.9■□□□□ 0.14
MID1O15344 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
MID1O15344 AC079776.1-201ENST00000401540 1152 ntBASIC15.9■□□□□ 0.14
MID1O15344 AC136604.1-201ENST00000418535 575 ntBASIC15.9■□□□□ 0.14
MID1O15344 AC112492.5-201ENST00000421897 457 ntBASIC15.9■□□□□ 0.14
MID1O15344 AC007274.1-201ENST00000439805 662 ntBASIC15.9■□□□□ 0.14
MID1O15344 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.9■□□□□ 0.14
MID1O15344 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.9■□□□□ 0.14
MID1O15344 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.9■□□□□ 0.14
MID1O15344 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.9■□□□□ 0.14
MID1O15344 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.9■□□□□ 0.14
MID1O15344 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.9■□□□□ 0.14
MID1O15344 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.9■□□□□ 0.14
MID1O15344 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MID1O15344 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
MID1O15344 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MID1O15344 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MID1O15344 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MID1O15344 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.9■□□□□ 0.14
MID1O15344 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
MID1O15344 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
MID1O15344 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.89■□□□□ 0.13
MID1O15344 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MID1O15344 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MID1O15344 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.89■□□□□ 0.13
MID1O15344 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.89■□□□□ 0.13
MID1O15344 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.89■□□□□ 0.13
MID1O15344 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
MID1O15344 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.89■□□□□ 0.13
MID1O15344 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.89■□□□□ 0.13
MID1O15344 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.89■□□□□ 0.13
MID1O15344 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
MID1O15344 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MID1O15344 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
MID1O15344 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.89■□□□□ 0.13
MID1O15344 AC007389.4-201ENST00000454674 793 ntBASIC15.89■□□□□ 0.13
MID1O15344 ACA64.2-201ENST00000459014 129 ntBASIC15.89■□□□□ 0.13
MID1O15344 FAM86LP-201ENST00000478302 853 ntBASIC15.89■□□□□ 0.13
MID1O15344 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.89■□□□□ 0.13
MID1O15344 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.89■□□□□ 0.13
MID1O15344 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
MID1O15344 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.89■□□□□ 0.13
MID1O15344 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.89■□□□□ 0.13
MID1O15344 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.89■□□□□ 0.13
MID1O15344 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MID1O15344 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.89■□□□□ 0.13
MID1O15344 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.89■□□□□ 0.13
MID1O15344 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
MID1O15344 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.89■□□□□ 0.13
MID1O15344 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.89■□□□□ 0.13
MID1O15344 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.89■□□□□ 0.13
MID1O15344 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
MID1O15344 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms