Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ATP2A1O14983 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A1O14983 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP2A1O14983 MIR5189-201ENST00000577370 114 ntBASIC18.15■□□□□ 0.5
ATP2A1O14983 MIR4259-201ENST00000584466 101 ntBASIC18.15■□□□□ 0.5
ATP2A1O14983 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A1O14983 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A1O14983 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A1O14983 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A1O14983 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A1O14983 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A1O14983 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A1O14983 AC011676.5-201ENST00000624864 2660 ntBASIC18.15■□□□□ 0.5
ATP2A1O14983 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
ATP2A1O14983 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A1O14983 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A1O14983 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATP2A1O14983 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ATP2A1O14983 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATP2A1O14983 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATP2A1O14983 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A1O14983 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ATP2A1O14983 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A1O14983 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ATP2A1O14983 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ATP2A1O14983 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.14■□□□□ 0.49
ATP2A1O14983 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ATP2A1O14983 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A1O14983 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A1O14983 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.14■□□□□ 0.49
ATP2A1O14983 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 AC234783.1-201ENST00000441761 496 ntBASIC18.14■□□□□ 0.49
ATP2A1O14983 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ATP2A1O14983 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A1O14983 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ATP2A1O14983 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.14■□□□□ 0.49
ATP2A1O14983 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.14■□□□□ 0.49
ATP2A1O14983 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ATP2A1O14983 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.14■□□□□ 0.49
ATP2A1O14983 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.14■□□□□ 0.49
ATP2A1O14983 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.14■□□□□ 0.49
ATP2A1O14983 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.49
ATP2A1O14983 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ATP2A1O14983 COX11-210ENST00000639671 696 ntBASIC18.14■□□□□ 0.49
ATP2A1O14983 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A1O14983 INTS4P2-202ENST00000614726 2019 ntBASIC18.14■□□□□ 0.49
ATP2A1O14983 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A1O14983 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.14■□□□□ 0.49
ATP2A1O14983 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.14■□□□□ 0.49
ATP2A1O14983 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A1O14983 AC011477.6-201ENST00000604980 1927 ntBASIC18.13■□□□□ 0.49
ATP2A1O14983 AC124067.4-201ENST00000519691 2379 ntBASIC18.13■□□□□ 0.49
ATP2A1O14983 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A1O14983 AL607033.1-201ENST00000623900 1599 ntBASIC18.13■□□□□ 0.49
ATP2A1O14983 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.13■□□□□ 0.49
ATP2A1O14983 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A1O14983 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP2A1O14983 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.13■□□□□ 0.49
ATP2A1O14983 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
ATP2A1O14983 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ATP2A1O14983 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A1O14983 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A1O14983 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ATP2A1O14983 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.13■□□□□ 0.49
ATP2A1O14983 AC134915.1-201ENST00000426461 574 ntBASIC18.13■□□□□ 0.49
ATP2A1O14983 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP2A1O14983 KRT43P-201ENST00000434019 910 ntBASIC18.13■□□□□ 0.49
ATP2A1O14983 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.13■□□□□ 0.49
ATP2A1O14983 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A1O14983 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.13■□□□□ 0.49
ATP2A1O14983 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ATP2A1O14983 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.13■□□□□ 0.49
ATP2A1O14983 SLC25A47P1-201ENST00000531577 414 ntBASIC18.13■□□□□ 0.49
ATP2A1O14983 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.13■□□□□ 0.49
ATP2A1O14983 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.13■□□□□ 0.49
ATP2A1O14983 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.13■□□□□ 0.49
ATP2A1O14983 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.13■□□□□ 0.49
ATP2A1O14983 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP2A1O14983 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.13■□□□□ 0.49
ATP2A1O14983 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.13■□□□□ 0.49
ATP2A1O14983 MIR6775-201ENST00000617557 69 ntBASIC18.13■□□□□ 0.49
ATP2A1O14983 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.13■□□□□ 0.49
ATP2A1O14983 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A1O14983 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A1O14983 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A1O14983 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A1O14983 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP2A1O14983 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms