Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM1O00151 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.28■□□□□ 0.04
PDLIM1O00151 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM1O00151 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM1O00151 AC007686.3-201ENST00000619017 3487 ntBASIC15.27■□□□□ 0.04
PDLIM1O00151 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PDLIM1O00151 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM1O00151 NCF1C-201ENST00000438382 1427 ntBASIC15.27■□□□□ 0.04
PDLIM1O00151 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.27■□□□□ 0.04
PDLIM1O00151 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM1O00151 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
PDLIM1O00151 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM1O00151 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
PDLIM1O00151 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.27■□□□□ 0.04
PDLIM1O00151 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PDLIM1O00151 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PDLIM1O00151 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PDLIM1O00151 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PDLIM1O00151 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM1O00151 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM1O00151 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM1O00151 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM1O00151 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM1O00151 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PDLIM1O00151 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.27■□□□□ 0.04
PDLIM1O00151 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM1O00151 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.27■□□□□ 0.04
PDLIM1O00151 AC139887.3-201ENST00000568585 713 ntBASIC15.27■□□□□ 0.04
PDLIM1O00151 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.27■□□□□ 0.04
PDLIM1O00151 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.27■□□□□ 0.04
PDLIM1O00151 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.27■□□□□ 0.04
PDLIM1O00151 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PDLIM1O00151 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM1O00151 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PDLIM1O00151 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDLIM1O00151 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PDLIM1O00151 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDLIM1O00151 AC087481.3-201ENST00000602886 1894 ntBASIC15.27■□□□□ 0.03
PDLIM1O00151 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDLIM1O00151 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.27■□□□□ 0.03
PDLIM1O00151 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDLIM1O00151 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.26■□□□□ 0.03
PDLIM1O00151 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PDLIM1O00151 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.26■□□□□ 0.03
PDLIM1O00151 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 DGCR9-201ENST00000609630 2415 ntBASIC15.26■□□□□ 0.03
PDLIM1O00151 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.26■□□□□ 0.03
PDLIM1O00151 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
PDLIM1O00151 LINC00552-201ENST00000625151 2579 ntBASIC15.26■□□□□ 0.03
PDLIM1O00151 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PDLIM1O00151 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.26■□□□□ 0.03
PDLIM1O00151 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.26■□□□□ 0.03
PDLIM1O00151 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PDLIM1O00151 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.26■□□□□ 0.03
PDLIM1O00151 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.26■□□□□ 0.03
PDLIM1O00151 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.26■□□□□ 0.03
PDLIM1O00151 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.26■□□□□ 0.03
PDLIM1O00151 AC012640.2-201ENST00000561606 901 ntBASIC15.26■□□□□ 0.03
PDLIM1O00151 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.26■□□□□ 0.03
PDLIM1O00151 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
PDLIM1O00151 AC004706.3-202ENST00000621574 984 ntBASIC15.26■□□□□ 0.03
PDLIM1O00151 PGM5P2-202ENST00000637225 1043 ntBASIC15.26■□□□□ 0.03
PDLIM1O00151 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.26■□□□□ 0.03
PDLIM1O00151 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.26■□□□□ 0.03
PDLIM1O00151 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.26■□□□□ 0.03
PDLIM1O00151 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.26■□□□□ 0.03
PDLIM1O00151 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.26■□□□□ 0.03
PDLIM1O00151 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 FLJ16779-201ENST00000612722 7638 ntBASIC15.26■□□□□ 0.03
PDLIM1O00151 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PDLIM1O00151 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.26■□□□□ 0.03
PDLIM1O00151 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PDLIM1O00151 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM1O00151 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PDLIM1O00151 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PDLIM1O00151 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM1O00151 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms