Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.06□□□□□ -0.16
NPIPB4C9JG80 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NPIPB4C9JG80 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.06□□□□□ -0.16
NPIPB4C9JG80 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPB4C9JG80 AL589739.1-201ENST00000607720 493 ntBASIC14.06□□□□□ -0.16
NPIPB4C9JG80 AL136317.3-201ENST00000618497 906 ntBASIC14.06□□□□□ -0.16
NPIPB4C9JG80 LINC00628-201ENST00000628516 1289 ntBASIC14.06□□□□□ -0.16
NPIPB4C9JG80 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB4C9JG80 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB4C9JG80 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB4C9JG80 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NPIPB4C9JG80 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB4C9JG80 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPB4C9JG80 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB4C9JG80 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPB4C9JG80 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 TARDBPP1-201ENST00000442013 1203 ntBASIC14.05□□□□□ -0.16
NPIPB4C9JG80 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 AL033527.5-202ENST00000641632 1098 ntBASIC14.05□□□□□ -0.16
NPIPB4C9JG80 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 FO538757.1-201ENST00000623083 1397 ntBASIC14.05□□□□□ -0.16
NPIPB4C9JG80 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 NFIC-211ENST00000641145 8399 ntBASIC14.05□□□□□ -0.16
NPIPB4C9JG80 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB4C9JG80 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 AP003680.1-201ENST00000598970 3660 ntBASIC14.04□□□□□ -0.16
NPIPB4C9JG80 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 TSEN15P1-201ENST00000423257 515 ntBASIC14.04□□□□□ -0.16
NPIPB4C9JG80 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 DNAJB3-202ENST00000449667 1266 ntBASIC14.04□□□□□ -0.16
NPIPB4C9JG80 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 SLED1-202ENST00000512051 380 ntBASIC14.04□□□□□ -0.16
NPIPB4C9JG80 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NPIPB4C9JG80 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms