Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.67■□□□□ 0.1
VGLL3A8MV65 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 AP003071.4-201ENST00000562276 1284 ntBASIC15.67■□□□□ 0.1
VGLL3A8MV65 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 AL031985.4-201ENST00000642138 673 ntBASIC15.67■□□□□ 0.1
VGLL3A8MV65 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.67■□□□□ 0.1
VGLL3A8MV65 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL3A8MV65 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 CICP1-201ENST00000416803 2410 ntBASIC15.66■□□□□ 0.1
VGLL3A8MV65 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
VGLL3A8MV65 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.66■□□□□ 0.1
VGLL3A8MV65 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 AC022400.8-201ENST00000623453 3599 ntBASIC15.66■□□□□ 0.1
VGLL3A8MV65 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.66■□□□□ 0.1
VGLL3A8MV65 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.66■□□□□ 0.1
VGLL3A8MV65 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.66■□□□□ 0.1
VGLL3A8MV65 CR392000.1-201ENST00000624770 1228 ntBASIC15.66■□□□□ 0.1
VGLL3A8MV65 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL3A8MV65 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
VGLL3A8MV65 MROH4P-201ENST00000431302 1578 ntBASIC15.66■□□□□ 0.1
VGLL3A8MV65 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
VGLL3A8MV65 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.65■□□□□ 0.1
VGLL3A8MV65 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.65■□□□□ 0.1
VGLL3A8MV65 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.65■□□□□ 0.1
VGLL3A8MV65 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
VGLL3A8MV65 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC15.65■□□□□ 0.1
VGLL3A8MV65 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC15.65■□□□□ 0.1
VGLL3A8MV65 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VGLL3A8MV65 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL3A8MV65 AC020658.7-201ENST00000624274 2442 ntBASIC15.65■□□□□ 0.1
VGLL3A8MV65 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL3A8MV65 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms