Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC23.19■■□□□ 1.3
HFM1A2PYH4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HFM1A2PYH4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HFM1A2PYH4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HFM1A2PYH4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 AC022137.2-201ENST00000503482 481 ntBASIC23.18■■□□□ 1.3
HFM1A2PYH4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HFM1A2PYH4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HFM1A2PYH4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
HFM1A2PYH4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HFM1A2PYH4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HFM1A2PYH4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HFM1A2PYH4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HFM1A2PYH4 AC090616.6-203ENST00000579186 1945 ntBASIC23.18■■□□□ 1.3
HFM1A2PYH4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC23.18■■□□□ 1.3
HFM1A2PYH4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HFM1A2PYH4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HFM1A2PYH4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HFM1A2PYH4 AC012441.1-201ENST00000446669 685 ntBASIC23.17■■□□□ 1.3
HFM1A2PYH4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 AC119751.2-201ENST00000504529 210 ntBASIC23.17■■□□□ 1.3
HFM1A2PYH4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HFM1A2PYH4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HFM1A2PYH4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HFM1A2PYH4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HFM1A2PYH4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HFM1A2PYH4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HFM1A2PYH4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HFM1A2PYH4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HFM1A2PYH4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HFM1A2PYH4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HFM1A2PYH4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC23.17■■□□□ 1.3
HFM1A2PYH4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 ACA64.2-201ENST00000459014 129 ntBASIC23.16■■□□□ 1.3
HFM1A2PYH4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 AC233724.13-201ENST00000598383 410 ntBASIC23.16■■□□□ 1.3
HFM1A2PYH4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 AC007950.2-201ENST00000615045 2347 ntBASIC23.16■■□□□ 1.3
HFM1A2PYH4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 AC112492.5-201ENST00000421897 457 ntBASIC23.16■■□□□ 1.3
HFM1A2PYH4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC23.16■■□□□ 1.3
HFM1A2PYH4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HFM1A2PYH4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC23.15■■□□□ 1.3
HFM1A2PYH4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HFM1A2PYH4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HFM1A2PYH4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HFM1A2PYH4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms