Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 AC073439.1-201ENST00000624121 1774 ntBASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 IER3-202ENST00000376377 1350 ntBASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 KRT18P34-201ENST00000488218 1270 ntBASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 KRT18P31-201ENST00000506277 1292 ntBASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 AC136632.2-201ENST00000512891 861 ntBASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 AL031432.2-201ENST00000566714 459 ntBASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 AL928711.1-201ENST00000570165 459 ntBASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 AL645728.2-201ENST00000641974 660 ntBASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 REXO1L1P-202ENST00000608646 1974 ntBASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV3S1A0A5B6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 BNIP3P1-202ENST00000550043 1585 ntBASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 HSPA7-201ENST00000445535 1927 ntBASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TCRBV3S1A0A5B6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms