Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AP001002.3-201ENST00000623482 206 ntBASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPBQ9Y5S2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDC42BPBQ9Y5S2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC23.49■■□□□ 1.35
CDC42BPBQ9Y5S2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CDC42BPBQ9Y5S2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CDC42BPBQ9Y5S2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDC42BPBQ9Y5S2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC23.49■■□□□ 1.35
CDC42BPBQ9Y5S2 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC23.49■■□□□ 1.35
CDC42BPBQ9Y5S2 TMEM198B-204ENST00000484016 896 ntBASIC23.49■■□□□ 1.35
CDC42BPBQ9Y5S2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC23.49■■□□□ 1.35
CDC42BPBQ9Y5S2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC23.49■■□□□ 1.35
CDC42BPBQ9Y5S2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC23.49■■□□□ 1.35
CDC42BPBQ9Y5S2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
CDC42BPBQ9Y5S2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 MIR4706-201ENST00000582134 82 ntBASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 AC018695.7-201ENST00000624587 2492 ntBASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
CDC42BPBQ9Y5S2 MIR33B-201ENST00000385104 96 ntBASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 NDUFAB1P1-201ENST00000404262 460 ntBASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 COX5BP1-201ENST00000507622 393 ntBASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 AC007274.2-201ENST00000421675 662 ntBASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 AF254983.2-201ENST00000612331 135 ntBASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 AC022748.3-201ENST00000621828 275 ntBASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPBQ9Y5S2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 AC008132.1-202ENST00000342005 1389 ntBASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 AC104457.1-201ENST00000401024 814 ntBASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42BPBQ9Y5S2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
CDC42BPBQ9Y5S2 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
CDC42BPBQ9Y5S2 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC23.45■■□□□ 1.34
CDC42BPBQ9Y5S2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPBQ9Y5S2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPBQ9Y5S2 ACTG1P2-201ENST00000415776 1125 ntBASIC23.45■■□□□ 1.34
CDC42BPBQ9Y5S2 ACTG1P11-201ENST00000425411 1125 ntBASIC23.45■■□□□ 1.34
CDC42BPBQ9Y5S2 AC100850.1-201ENST00000506768 649 ntBASIC23.45■■□□□ 1.34
CDC42BPBQ9Y5S2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC23.45■■□□□ 1.34
CDC42BPBQ9Y5S2 FGFR3P5-201ENST00000564496 886 ntBASIC23.45■■□□□ 1.34
CDC42BPBQ9Y5S2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
CDC42BPBQ9Y5S2 OR10B1P-201ENST00000601666 907 ntBASIC23.45■■□□□ 1.34
CDC42BPBQ9Y5S2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPBQ9Y5S2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42BPBQ9Y5S2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms