Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.52■□□□□ 0.07
PCDHGA11Q9Y5H2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA11Q9Y5H2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA11Q9Y5H2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA11Q9Y5H2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA11Q9Y5H2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA11Q9Y5H2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
PCDHGA11Q9Y5H2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 ALG1L5P-201ENST00000482043 771 ntBASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 UXT-AS1-201ENST00000590504 1525 ntBASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA11Q9Y5H2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 AC134407.2-201ENST00000625089 1978 ntBASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 AP000347.1-202ENST00000435868 847 ntBASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 MIR3687-2-201ENST00000577708 61 ntBASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 MIR3687-1-201ENST00000614492 61 ntBASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 AC055717.3-201ENST00000622967 595 ntBASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 AL691432.1-201ENST00000596308 1422 ntBASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGA11Q9Y5H2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms