Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 KRT16P4-201ENST00000453883 522 ntBASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 SLC25A6P2-201ENST00000497974 877 ntBASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 AC099336.1-202ENST00000602961 463 ntBASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 LINC01023-201ENST00000606054 436 ntBASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 GGTLC5P-201ENST00000617623 998 ntBASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
KCNIP3Q9Y2W7 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 AL137784.3-201ENST00000623858 2288 ntBASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 DUX4L26-201ENST00000489078 1255 ntBASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 AP000867.3-201ENST00000524675 377 ntBASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 AC012615.1-201ENST00000565797 1299 ntBASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 AC004706.3-202ENST00000621574 984 ntBASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.41□□□□□ -0.26
KCNIP3Q9Y2W7 AC005332.1-201ENST00000577698 1310 ntBASIC13.4□□□□□ -0.26
KCNIP3Q9Y2W7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms