Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.71□□□□□ -0.05
RPH3AQ9Y2J0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.71□□□□□ -0.06
RPH3AQ9Y2J0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
RPH3AQ9Y2J0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RPH3AQ9Y2J0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.71□□□□□ -0.06
RPH3AQ9Y2J0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RPH3AQ9Y2J0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RPH3AQ9Y2J0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RPH3AQ9Y2J0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RPH3AQ9Y2J0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RPH3AQ9Y2J0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RPH3AQ9Y2J0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 AC105021.1-202ENST00000570572 669 ntBASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 AL596087.1-201ENST00000400979 1969 ntBASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 FO538757.1-201ENST00000623083 1397 ntBASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 LINC02199-201ENST00000506655 2702 ntBASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 AC026691.1-201ENST00000602502 2017 ntBASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
RPH3AQ9Y2J0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.69□□□□□ -0.06
RPH3AQ9Y2J0 HLA-V-201ENST00000429037 534 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms