Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 DOC2GP-204ENST00000639052 2548 ntBASIC16.48■□□□□ 0.23
SCML2Q9UQR0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.48■□□□□ 0.23
SCML2Q9UQR0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 CTBP2P3-201ENST00000585629 1255 ntBASIC16.47■□□□□ 0.23
SCML2Q9UQR0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCML2Q9UQR0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 AL121723.1-201ENST00000445194 1519 ntBASIC16.46■□□□□ 0.23
SCML2Q9UQR0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 AP006294.1-201ENST00000415407 339 ntBASIC16.46■□□□□ 0.23
SCML2Q9UQR0 COX5BP8-201ENST00000416911 349 ntBASIC16.46■□□□□ 0.23
SCML2Q9UQR0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 GAPDHP21-201ENST00000450301 1010 ntBASIC16.46■□□□□ 0.23
SCML2Q9UQR0 KRT18P43-201ENST00000469825 1281 ntBASIC16.46■□□□□ 0.23
SCML2Q9UQR0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 FAM86LP-201ENST00000478302 853 ntBASIC16.46■□□□□ 0.23
SCML2Q9UQR0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 CR383656.12-201ENST00000549567 513 ntBASIC16.46■□□□□ 0.23
SCML2Q9UQR0 AC000095.1-201ENST00000603208 874 ntBASIC16.46■□□□□ 0.23
SCML2Q9UQR0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCML2Q9UQR0 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.46■□□□□ 0.23
SCML2Q9UQR0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms