Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 AC090616.6-203ENST00000579186 1945 ntBASIC14.29□□□□□ -0.12
COPS3Q9UNS2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 AC105250.1-201ENST00000509378 2057 ntBASIC14.29□□□□□ -0.12
COPS3Q9UNS2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 SNX18-202ENST00000343017 3140 ntBASIC14.28□□□□□ -0.12
COPS3Q9UNS2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 RNA5SP415-201ENST00000517246 115 ntBASIC14.28□□□□□ -0.12
COPS3Q9UNS2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 AC002347.1-201ENST00000569543 541 ntBASIC14.28□□□□□ -0.12
COPS3Q9UNS2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COPS3Q9UNS2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 AP001282.1-201ENST00000531301 1499 ntBASIC14.27□□□□□ -0.12
COPS3Q9UNS2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS3Q9UNS2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 GPX1P2-201ENST00000429271 606 ntBASIC14.27□□□□□ -0.13
COPS3Q9UNS2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 RNA5SP419-201ENST00000515908 135 ntBASIC14.27□□□□□ -0.13
COPS3Q9UNS2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COPS3Q9UNS2 AC009090.5-201ENST00000624886 2285 ntBASIC14.27□□□□□ -0.13
COPS3Q9UNS2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms