Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPO2Q9UMS6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SYNPO2Q9UMS6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SYNPO2Q9UMS6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.5
SYNPO2Q9UMS6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SYNPO2Q9UMS6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SYNPO2Q9UMS6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPO2Q9UMS6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 AC092933.1-201ENST00000393644 945 ntBASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 AC093433.1-201ENST00000458048 571 ntBASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPO2Q9UMS6 AC024909.3-201ENST00000611513 2257 ntBASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 AL118508.1-201ENST00000613502 2345 ntBASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SYNPO2Q9UMS6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms