Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 AC004840.1-201ENST00000636359 365 ntBASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 LINC02199-201ENST00000506655 2702 ntBASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 AC138969.3-201ENST00000546612 1459 ntBASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 AC138932.2-201ENST00000548268 1459 ntBASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 AC126755.4-201ENST00000549796 1459 ntBASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 AL136982.4-201ENST00000437689 1740 ntBASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 AC114501.2-201ENST00000439631 535 ntBASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 DOC2GP-202ENST00000514950 1163 ntBASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 AC010336.2-201ENST00000564226 506 ntBASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 MIR6752-201ENST00000618442 71 ntBASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 AL033527.5-202ENST00000641632 1098 ntBASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 AC134407.2-201ENST00000625089 1978 ntBASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FOXD3Q9UJU5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXD3Q9UJU5 AC004987.2-201ENST00000395959 1148 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms