Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 INE1-201ENST00000456273 945 ntBASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 SRD5A3P1-201ENST00000603021 949 ntBASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 IGHV3-72-202ENST00000621503 303 ntBASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 AC004461.2-201ENST00000629517 803 ntBASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC6Q9UBN7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 AP006294.1-201ENST00000415407 339 ntBASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 ARSEP1-201ENST00000420443 635 ntBASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 SDHAP3-202ENST00000515467 728 ntBASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 AC006538.1-201ENST00000567905 1585 ntBASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 MTHFR-217ENST00000641820 1569 ntBASIC18.02■□□□□ 0.48
HDAC6Q9UBN7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HDAC6Q9UBN7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.02■□□□□ 0.47
HDAC6Q9UBN7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
HDAC6Q9UBN7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HDAC6Q9UBN7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
HDAC6Q9UBN7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HDAC6Q9UBN7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
HDAC6Q9UBN7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 AC092850.2-201ENST00000623821 2697 ntBASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 ATP5G2P4-201ENST00000442175 420 ntBASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 AL139010.1-201ENST00000454878 894 ntBASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 RN7SL752P-201ENST00000463779 287 ntBASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 GIMAP3P-201ENST00000495150 836 ntBASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 AC007431.3-201ENST00000623221 587 ntBASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 AL109936.8-201ENST00000641772 604 ntBASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HDAC6Q9UBN7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms