Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.25□□□□□ -0.13
NLKQ9UBE8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 AL139011.1-202ENST00000642063 584 ntBASIC14.25□□□□□ -0.13
NLKQ9UBE8 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 AC005840.4-201ENST00000541242 2494 ntBASIC14.25□□□□□ -0.13
NLKQ9UBE8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 TOP3BP1-201ENST00000420768 1380 ntBASIC14.24□□□□□ -0.13
NLKQ9UBE8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 AL671710.1-201ENST00000610245 2349 ntBASIC14.24□□□□□ -0.13
NLKQ9UBE8 HLA-A-201ENST00000376802 1334 ntBASIC14.24□□□□□ -0.13
NLKQ9UBE8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 AC098831.1-202ENST00000438821 336 ntBASIC14.24□□□□□ -0.13
NLKQ9UBE8 RNA5SP419-201ENST00000515908 135 ntBASIC14.24□□□□□ -0.13
NLKQ9UBE8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 AC116407.3-201ENST00000623905 1129 ntBASIC14.24□□□□□ -0.13
NLKQ9UBE8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 AC079781.5-202ENST00000641784 3743 ntBASIC14.24□□□□□ -0.13
NLKQ9UBE8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NLKQ9UBE8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.24□□□□□ -0.13
NLKQ9UBE8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NLKQ9UBE8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NLKQ9UBE8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NLKQ9UBE8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.23□□□□□ -0.13
NLKQ9UBE8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NLKQ9UBE8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.23□□□□□ -0.13
NLKQ9UBE8 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.23□□□□□ -0.13
NLKQ9UBE8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms