Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 MIR4525-201ENST00000580000 75 ntBASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 MIR4538-201ENST00000581377 78 ntBASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC10Q9NYD6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 MIR1908-201ENST00000410394 80 ntBASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 RN7SL219P-201ENST00000582872 296 ntBASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
HOXC10Q9NYD6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 AL355994.2-201ENST00000447882 704 ntBASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 AC022137.2-201ENST00000503482 481 ntBASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 MIR6869-201ENST00000619434 62 ntBASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 MSTO2P-201ENST00000314835 1709 ntBASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC10Q9NYD6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.08■□□□□ 0.49
HOXC10Q9NYD6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC10Q9NYD6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC10Q9NYD6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC10Q9NYD6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC10Q9NYD6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.08■□□□□ 0.49
HOXC10Q9NYD6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC10Q9NYD6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC10Q9NYD6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.08■□□□□ 0.48
HOXC10Q9NYD6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.48
HOXC10Q9NYD6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HOXC10Q9NYD6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.08■□□□□ 0.48
HOXC10Q9NYD6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
HOXC10Q9NYD6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.08■□□□□ 0.48
HOXC10Q9NYD6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.08■□□□□ 0.48
HOXC10Q9NYD6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.08■□□□□ 0.48
HOXC10Q9NYD6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms