Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 AL035456.1-201ENST00000456064 1369 ntBASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CUEDC1Q9NWM3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 RN7SL204P-201ENST00000582831 262 ntBASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 AL008721.1-201ENST00000609964 604 ntBASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 SPDYE12P-201ENST00000618416 771 ntBASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.46■□□□□ 0.07
CUEDC1Q9NWM3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CUEDC1Q9NWM3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CUEDC1Q9NWM3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CUEDC1Q9NWM3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CUEDC1Q9NWM3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 AC092850.2-201ENST00000623821 2697 ntBASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 AC107890.1-201ENST00000422478 521 ntBASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 AC007274.1-201ENST00000439805 662 ntBASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 PRAL-201ENST00000624952 3286 ntBASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CUEDC1Q9NWM3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms