Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 RERG-205ENST00000537647 935 ntTSL 2 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 AC079328.1-201ENST00000560358 952 ntBASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 AL023775.1-201ENST00000454907 1746 ntBASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 AC092171.3-201ENST00000610122 2651 ntBASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC22.42■■□□□ 1.18
SLC52A1Q9NWF4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 AC016629.1-201ENST00000596579 586 ntBASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC52A1Q9NWF4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 AC079178.1-201ENST00000420915 656 ntBASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 AC138627.1-207ENST00000641560 1006 ntBASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SLC52A1Q9NWF4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SLC52A1Q9NWF4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC22.39■■□□□ 1.18
SLC52A1Q9NWF4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLC52A1Q9NWF4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC22.39■■□□□ 1.18
SLC52A1Q9NWF4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SLC52A1Q9NWF4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLC52A1Q9NWF4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLC52A1Q9NWF4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 AL645937.2-201ENST00000396808 931 ntBASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 CHMP4BP1-201ENST00000556017 588 ntBASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 AC025181.2-201ENST00000606994 802 ntBASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 ENPP7P14-201ENST00000621765 1040 ntBASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC22.39■■□□□ 1.17
SLC52A1Q9NWF4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms