Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMC4Q9NTJ3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SMC4Q9NTJ3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.44■□□□□ 0.86
SMC4Q9NTJ3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 AC092127.1-201ENST00000567093 3455 ntBASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 HLA-V-204ENST00000476601 1289 ntBASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 AC069120.2-201ENST00000524091 540 ntBASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 AC140878.1-201ENST00000565277 250 ntBASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 FO538757.1-201ENST00000623083 1397 ntBASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC20.43■□□□□ 0.86
SMC4Q9NTJ3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 TREML5P-201ENST00000421694 576 ntBASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 TEX28P1-201ENST00000613479 1221 ntBASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 TEX28P2-201ENST00000617764 1221 ntBASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 AC073592.8-201ENST00000624126 511 ntBASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SMC4Q9NTJ3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 DUX4L27-201ENST00000554796 1261 ntBASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 AC097359.3-201ENST00000603982 1210 ntBASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 AC106028.4-201ENST00000614509 607 ntBASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMC4Q9NTJ3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMC4Q9NTJ3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMC4Q9NTJ3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20.4■□□□□ 0.86
SMC4Q9NTJ3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMC4Q9NTJ3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMC4Q9NTJ3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
SMC4Q9NTJ3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms