Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM7Q9NR12 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 AC124067.4-201ENST00000519691 2379 ntBASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 AC136604.1-201ENST00000418535 575 ntBASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 AL355864.2-201ENST00000447420 863 ntBASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM7Q9NR12 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 RPL13P2-201ENST00000440687 659 ntBASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 TARDBPP1-201ENST00000442013 1203 ntBASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 KRT8P13-201ENST00000463294 1010 ntBASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 FAM86LP-201ENST00000478302 853 ntBASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 FTH1P14-201ENST00000482930 551 ntBASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 ENPP7P5-201ENST00000541031 1031 ntBASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 HNRNPUP1-201ENST00000554987 333 ntBASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 LINC02447-202ENST00000501888 2146 ntBASIC17.65■□□□□ 0.42
PDLIM7Q9NR12 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.64■□□□□ 0.42
PDLIM7Q9NR12 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDLIM7Q9NR12 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
PDLIM7Q9NR12 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDLIM7Q9NR12 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM7Q9NR12 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms