Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC19.01■□□□□ 0.63
RTN4Q9NQC3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.01■□□□□ 0.63
RTN4Q9NQC3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTN4Q9NQC3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC19.01■□□□□ 0.63
RTN4Q9NQC3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RTN4Q9NQC3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTN4Q9NQC3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RTN4Q9NQC3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19■□□□□ 0.63
RTN4Q9NQC3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RTN4Q9NQC3 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RTN4Q9NQC3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19■□□□□ 0.63
RTN4Q9NQC3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RTN4Q9NQC3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 AC005521.1-201ENST00000393351 872 ntBASIC19■□□□□ 0.63
RTN4Q9NQC3 LLPH-202ENST00000446587 1177 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RTN4Q9NQC3 RN7SL606P-201ENST00000472779 293 ntBASIC19■□□□□ 0.63
RTN4Q9NQC3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 TK2-213ENST00000563369 882 ntTSL 5 BASIC19■□□□□ 0.63
RTN4Q9NQC3 RN7SL440P-201ENST00000577855 343 ntBASIC19■□□□□ 0.63
RTN4Q9NQC3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19■□□□□ 0.63
RTN4Q9NQC3 AC006011.2-201ENST00000621313 1158 ntBASIC19■□□□□ 0.63
RTN4Q9NQC3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RTN4Q9NQC3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC19■□□□□ 0.63
RTN4Q9NQC3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19■□□□□ 0.63
RTN4Q9NQC3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC19■□□□□ 0.63
RTN4Q9NQC3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
RTN4Q9NQC3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
RTN4Q9NQC3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC19■□□□□ 0.63
RTN4Q9NQC3 CICP11-201ENST00000434745 2827 ntBASIC19■□□□□ 0.63
RTN4Q9NQC3 AL390755.1-201ENST00000623716 2027 ntBASIC19■□□□□ 0.63
RTN4Q9NQC3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4Q9NQC3 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 AC027281.2-201ENST00000623856 713 ntBASIC18.99■□□□□ 0.63
RTN4Q9NQC3 AC099654.11-201ENST00000638857 294 ntBASIC18.99■□□□□ 0.63
RTN4Q9NQC3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4Q9NQC3 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 EGFEM1P-202ENST00000431685 1563 ntBASIC18.98■□□□□ 0.63
RTN4Q9NQC3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4Q9NQC3 AL138831.2-201ENST00000606564 490 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms