Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSU72Q9NP77 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 TP73-AS1-207ENST00000624167 988 ntBASIC15.82■□□□□ 0.12
SSU72Q9NP77 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSU72Q9NP77 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSU72Q9NP77 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSU72Q9NP77 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSU72Q9NP77 WASH3P-207ENST00000560956 1394 ntBASIC15.82■□□□□ 0.12
SSU72Q9NP77 FO538757.1-201ENST00000623083 1397 ntBASIC15.82■□□□□ 0.12
SSU72Q9NP77 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSU72Q9NP77 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSU72Q9NP77 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSU72Q9NP77 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSU72Q9NP77 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SSU72Q9NP77 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 AC063926.3-201ENST00000624734 5658 ntBASIC15.81■□□□□ 0.12
SSU72Q9NP77 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 AC140658.5-201ENST00000438532 169 ntBASIC15.81■□□□□ 0.12
SSU72Q9NP77 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 AC012640.2-201ENST00000561606 901 ntBASIC15.81■□□□□ 0.12
SSU72Q9NP77 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 AC024267.1-201ENST00000582320 895 ntBASIC15.81■□□□□ 0.12
SSU72Q9NP77 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 LINC01711-201ENST00000598340 967 ntBASIC15.81■□□□□ 0.12
SSU72Q9NP77 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 AC093458.2-201ENST00000623150 629 ntBASIC15.81■□□□□ 0.12
SSU72Q9NP77 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSU72Q9NP77 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
SSU72Q9NP77 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSU72Q9NP77 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSU72Q9NP77 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSU72Q9NP77 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSU72Q9NP77 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSU72Q9NP77 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSU72Q9NP77 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSU72Q9NP77 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSU72Q9NP77 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSU72Q9NP77 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSU72Q9NP77 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.8■□□□□ 0.12
SSU72Q9NP77 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.8■□□□□ 0.12
SSU72Q9NP77 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms