Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 TMEM261P1-201ENST00000604899 340 ntBASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
KIAA1549Q9HCM3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 ANKRD19P-201ENST00000338192 862 ntBASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 AC098614.1-201ENST00000368528 745 ntBASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 AC087499.6-201ENST00000411576 835 ntBASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 AC036164.1-201ENST00000570544 333 ntBASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
KIAA1549Q9HCM3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms