Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CBX8Q9HC52 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX8Q9HC52 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.83■□□□□ 0.45
CBX8Q9HC52 AJ011931.1-201ENST00000618749 2492 ntBASIC17.83■□□□□ 0.45
CBX8Q9HC52 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CBX8Q9HC52 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
CBX8Q9HC52 AC063926.3-201ENST00000624734 5658 ntBASIC17.83■□□□□ 0.45
CBX8Q9HC52 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.83■□□□□ 0.45
CBX8Q9HC52 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CBX8Q9HC52 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.83■□□□□ 0.45
CBX8Q9HC52 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.83■□□□□ 0.45
CBX8Q9HC52 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CBX8Q9HC52 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CBX8Q9HC52 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX8Q9HC52 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX8Q9HC52 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CBX8Q9HC52 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX8Q9HC52 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX8Q9HC52 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CBX8Q9HC52 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX8Q9HC52 AC092474.2-201ENST00000424288 719 ntBASIC17.83■□□□□ 0.44
CBX8Q9HC52 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CBX8Q9HC52 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX8Q9HC52 AC073648.2-201ENST00000510116 352 ntBASIC17.83■□□□□ 0.44
CBX8Q9HC52 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX8Q9HC52 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX8Q9HC52 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.83■□□□□ 0.44
CBX8Q9HC52 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CBX8Q9HC52 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX8Q9HC52 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX8Q9HC52 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX8Q9HC52 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX8Q9HC52 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
CBX8Q9HC52 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CBX8Q9HC52 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CBX8Q9HC52 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.83■□□□□ 0.44
CBX8Q9HC52 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX8Q9HC52 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX8Q9HC52 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX8Q9HC52 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBX8Q9HC52 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CBX8Q9HC52 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBX8Q9HC52 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CBX8Q9HC52 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX8Q9HC52 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX8Q9HC52 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.81■□□□□ 0.44
CBX8Q9HC52 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX8Q9HC52 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX8Q9HC52 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX8Q9HC52 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX8Q9HC52 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX8Q9HC52 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX8Q9HC52 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CBX8Q9HC52 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CBX8Q9HC52 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CBX8Q9HC52 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBX8Q9HC52 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.81■□□□□ 0.44
CBX8Q9HC52 PRSS29P-201ENST00000440800 595 ntBASIC17.81■□□□□ 0.44
CBX8Q9HC52 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.81■□□□□ 0.44
CBX8Q9HC52 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.81■□□□□ 0.44
CBX8Q9HC52 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.81■□□□□ 0.44
CBX8Q9HC52 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.81■□□□□ 0.44
CBX8Q9HC52 AC117500.6-201ENST00000624871 588 ntBASIC17.81■□□□□ 0.44
CBX8Q9HC52 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.81■□□□□ 0.44
CBX8Q9HC52 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.81■□□□□ 0.44
CBX8Q9HC52 BNIP3P1-202ENST00000550043 1585 ntBASIC17.81■□□□□ 0.44
CBX8Q9HC52 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms