Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 AL033527.5-201ENST00000641382 801 ntBASIC17.12■□□□□ 0.33
NXF3Q9H4D5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 LINC02447-202ENST00000501888 2146 ntBASIC17.12■□□□□ 0.33
NXF3Q9H4D5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 HILS1-202ENST00000545329 423 ntBASIC17.11■□□□□ 0.33
NXF3Q9H4D5 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 RPSAP52-203ENST00000622976 1023 ntBASIC17.11■□□□□ 0.33
NXF3Q9H4D5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.11■□□□□ 0.33
NXF3Q9H4D5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 AC099398.1-201ENST00000567919 2776 ntBASIC17.1■□□□□ 0.33
NXF3Q9H4D5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.1■□□□□ 0.33
NXF3Q9H4D5 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 MIR4313-201ENST00000580760 101 ntBASIC17.1■□□□□ 0.33
NXF3Q9H4D5 BRI3BPP1-201ENST00000594224 787 ntBASIC17.1■□□□□ 0.33
NXF3Q9H4D5 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NXF3Q9H4D5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms