Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CNTNAP4Q9C0A0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 AC016700.1-201ENST00000429424 312 ntBASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 ENPP7P14-201ENST00000621765 1040 ntBASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP4Q9C0A0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 AC092171.3-201ENST00000610122 2651 ntBASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 KRTAP19-9P-201ENST00000421795 191 ntBASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 AC025181.2-201ENST00000606994 802 ntBASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CNTNAP4Q9C0A0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 RN7SL769P-201ENST00000469386 295 ntBASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 AC244157.2-201ENST00000616239 1006 ntBASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP4Q9C0A0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.68■□□□□ 0.74
CNTNAP4Q9C0A0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP4Q9C0A0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CNTNAP4Q9C0A0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP4Q9C0A0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP4Q9C0A0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CNTNAP4Q9C0A0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CNTNAP4Q9C0A0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP4Q9C0A0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms