Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AP005018.1-201ENST00000525475 301 ntBASIC16.63■□□□□ 0.25
SMOQ99835 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.63■□□□□ 0.25
SMOQ99835 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.63■□□□□ 0.25
SMOQ99835 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.63■□□□□ 0.25
SMOQ99835 RARRES2P5-201ENST00000564013 466 ntBASIC16.63■□□□□ 0.25
SMOQ99835 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.63■□□□□ 0.25
SMOQ99835 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
SMOQ99835 AC105233.6-201ENST00000642093 218 ntBASIC16.63■□□□□ 0.25
SMOQ99835 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SMOQ99835 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SMOQ99835 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.63■□□□□ 0.25
SMOQ99835 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.63■□□□□ 0.25
SMOQ99835 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SMOQ99835 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SMOQ99835 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.63■□□□□ 0.25
SMOQ99835 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 AL391825.1-201ENST00000457671 1364 ntBASIC16.63■□□□□ 0.25
SMOQ99835 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.63■□□□□ 0.25
SMOQ99835 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.62■□□□□ 0.25
SMOQ99835 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.62■□□□□ 0.25
SMOQ99835 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.62■□□□□ 0.25
SMOQ99835 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.62■□□□□ 0.25
SMOQ99835 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 CLK3P2-201ENST00000427566 1453 ntBASIC16.62■□□□□ 0.25
SMOQ99835 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.62■□□□□ 0.25
SMOQ99835 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SMOQ99835 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.62■□□□□ 0.25
SMOQ99835 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.62■□□□□ 0.25
SMOQ99835 AC098850.1-201ENST00000419919 790 ntBASIC16.62■□□□□ 0.25
SMOQ99835 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.62■□□□□ 0.25
SMOQ99835 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.62■□□□□ 0.25
SMOQ99835 AC140912.1-201ENST00000577171 1054 ntBASIC16.62■□□□□ 0.25
SMOQ99835 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.62■□□□□ 0.25
SMOQ99835 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.62■□□□□ 0.25
SMOQ99835 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.62■□□□□ 0.25
SMOQ99835 AC099568.2-201ENST00000609194 695 ntBASIC16.62■□□□□ 0.25
SMOQ99835 MIR8072-201ENST00000614241 80 ntBASIC16.62■□□□□ 0.25
SMOQ99835 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 AC025048.6-201ENST00000634326 1161 ntBASIC16.62■□□□□ 0.25
SMOQ99835 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.62■□□□□ 0.25
SMOQ99835 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.62■□□□□ 0.25
SMOQ99835 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SMOQ99835 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.62■□□□□ 0.25
SMOQ99835 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMOQ99835 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.61■□□□□ 0.25
SMOQ99835 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMOQ99835 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
SMOQ99835 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.61■□□□□ 0.25
SMOQ99835 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMOQ99835 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMOQ99835 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.61■□□□□ 0.25
SMOQ99835 AP005117.1-202ENST00000581724 1908 ntBASIC16.61■□□□□ 0.25
SMOQ99835 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.61■□□□□ 0.25
SMOQ99835 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.61■□□□□ 0.25
SMOQ99835 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMOQ99835 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMOQ99835 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMOQ99835 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.61■□□□□ 0.25
SMOQ99835 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SMOQ99835 AC087499.6-201ENST00000411576 835 ntBASIC16.61■□□□□ 0.25
SMOQ99835 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.61■□□□□ 0.25
SMOQ99835 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.61■□□□□ 0.25
SMOQ99835 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.61■□□□□ 0.25
SMOQ99835 WASH4P-201ENST00000564273 1246 ntBASIC16.61■□□□□ 0.25
SMOQ99835 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
SMOQ99835 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.61■□□□□ 0.25
SMOQ99835 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.61■□□□□ 0.25
SMOQ99835 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.61■□□□□ 0.25
SMOQ99835 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMOQ99835 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMOQ99835 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SMOQ99835 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMOQ99835 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SMOQ99835 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMOQ99835 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SMOQ99835 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.61■□□□□ 0.25
SMOQ99835 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.61■□□□□ 0.25
SMOQ99835 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.6■□□□□ 0.25
SMOQ99835 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.6■□□□□ 0.25
SMOQ99835 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms