Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC105250.1-201ENST00000509378 2057 ntBASIC18.86■□□□□ 0.61
NEK1Q96PY6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NEK1Q96PY6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.86■□□□□ 0.61
NEK1Q96PY6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.85■□□□□ 0.61
NEK1Q96PY6 SSR4P1-203ENST00000599569 2260 ntBASIC18.85■□□□□ 0.61
NEK1Q96PY6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 AL079307.3-201ENST00000556114 283 ntBASIC18.85■□□□□ 0.61
NEK1Q96PY6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 AC136621.1-201ENST00000624017 2304 ntBASIC18.85■□□□□ 0.61
NEK1Q96PY6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NEK1Q96PY6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEK1Q96PY6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
NEK1Q96PY6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NEK1Q96PY6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 KRT8P12-202ENST00000472924 1397 ntBASIC18.84■□□□□ 0.61
NEK1Q96PY6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.84■□□□□ 0.61
NEK1Q96PY6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.84■□□□□ 0.61
NEK1Q96PY6 FO393414.2-201ENST00000405153 598 ntBASIC18.84■□□□□ 0.61
NEK1Q96PY6 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.84■□□□□ 0.61
NEK1Q96PY6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.84■□□□□ 0.61
NEK1Q96PY6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.84■□□□□ 0.61
NEK1Q96PY6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.84■□□□□ 0.61
NEK1Q96PY6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.84■□□□□ 0.61
NEK1Q96PY6 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.84■□□□□ 0.61
NEK1Q96PY6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.84■□□□□ 0.61
NEK1Q96PY6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEK1Q96PY6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEK1Q96PY6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.83■□□□□ 0.61
NEK1Q96PY6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEK1Q96PY6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEK1Q96PY6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEK1Q96PY6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEK1Q96PY6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEK1Q96PY6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEK1Q96PY6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEK1Q96PY6 KRT18P28-201ENST00000453838 1332 ntBASIC18.83■□□□□ 0.61
NEK1Q96PY6 AC073347.1-201ENST00000421633 2643 ntBASIC18.83■□□□□ 0.61
NEK1Q96PY6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEK1Q96PY6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEK1Q96PY6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEK1Q96PY6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NEK1Q96PY6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.83■□□□□ 0.6
NEK1Q96PY6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.83■□□□□ 0.6
NEK1Q96PY6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.83■□□□□ 0.6
NEK1Q96PY6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.83■□□□□ 0.6
NEK1Q96PY6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.83■□□□□ 0.6
NEK1Q96PY6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.83■□□□□ 0.6
NEK1Q96PY6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.83■□□□□ 0.6
NEK1Q96PY6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms