Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL589702.1-201ENST00000641229 1509 ntBASIC18.98■□□□□ 0.63
DDX11Q96FC9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
DDX11Q96FC9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX11Q96FC9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
DDX11Q96FC9 AP005117.1-202ENST00000581724 1908 ntBASIC18.98■□□□□ 0.63
DDX11Q96FC9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX11Q96FC9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX11Q96FC9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DDX11Q96FC9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX11Q96FC9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DDX11Q96FC9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
DDX11Q96FC9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
DDX11Q96FC9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.96■□□□□ 0.63
DDX11Q96FC9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX11Q96FC9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX11Q96FC9 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX11Q96FC9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX11Q96FC9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX11Q96FC9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.96■□□□□ 0.63
DDX11Q96FC9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX11Q96FC9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX11Q96FC9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
DDX11Q96FC9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.95■□□□□ 0.62
DDX11Q96FC9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.95■□□□□ 0.62
DDX11Q96FC9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX11Q96FC9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
DDX11Q96FC9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
DDX11Q96FC9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.95■□□□□ 0.62
DDX11Q96FC9 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.95■□□□□ 0.62
DDX11Q96FC9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX11Q96FC9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX11Q96FC9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX11Q96FC9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
DDX11Q96FC9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.95■□□□□ 0.62
DDX11Q96FC9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX11Q96FC9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms