Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 AC134698.3-201ENST00000523880 214 ntBASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 AC007663.3-201ENST00000609632 465 ntBASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 BX539320.1-201ENST00000623759 877 ntBASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 AC005915.1-201ENST00000624912 2018 ntBASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 RPL17P11-201ENST00000417593 544 ntBASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 FGFR3P5-201ENST00000564496 886 ntBASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 MIR3907-201ENST00000579424 151 ntBASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM43Q96BQ3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 TPM3P8-201ENST00000330554 643 ntBASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 MAGEA5-201ENST00000446757 942 ntBASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 FTLP1-201ENST00000449155 526 ntBASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 SERPINA13P-202ENST00000478994 924 ntBASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 AC139713.2-201ENST00000641328 2723 ntBASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM43Q96BQ3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms