Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 AP002414.3-201ENST00000589352 1468 ntBASIC14.21□□□□□ -0.13
RFT1Q96AA3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
RFT1Q96AA3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.21□□□□□ -0.13
RFT1Q96AA3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.21□□□□□ -0.13
RFT1Q96AA3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.21□□□□□ -0.13
RFT1Q96AA3 RNPS1P1-201ENST00000507437 918 ntBASIC14.21□□□□□ -0.13
RFT1Q96AA3 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.21□□□□□ -0.13
RFT1Q96AA3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.21□□□□□ -0.13
RFT1Q96AA3 AC005412.3-201ENST00000580309 715 ntBASIC14.21□□□□□ -0.13
RFT1Q96AA3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.21□□□□□ -0.13
RFT1Q96AA3 CICP23-201ENST00000605013 2741 ntBASIC14.21□□□□□ -0.13
RFT1Q96AA3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 LINC00528-201ENST00000600723 2160 ntBASIC14.21□□□□□ -0.13
RFT1Q96AA3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
RFT1Q96AA3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.21□□□□□ -0.13
RFT1Q96AA3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RFT1Q96AA3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFT1Q96AA3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RFT1Q96AA3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.21□□□□□ -0.14
RFT1Q96AA3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.21□□□□□ -0.14
RFT1Q96AA3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RFT1Q96AA3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RFT1Q96AA3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RFT1Q96AA3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
RFT1Q96AA3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RFT1Q96AA3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 AC129492.6-201ENST00000611383 1305 ntBASIC14.2□□□□□ -0.14
RFT1Q96AA3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 KRT18P56-201ENST00000507275 550 ntBASIC14.2□□□□□ -0.14
RFT1Q96AA3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.2□□□□□ -0.14
RFT1Q96AA3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.2□□□□□ -0.14
RFT1Q96AA3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.2□□□□□ -0.14
RFT1Q96AA3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFT1Q96AA3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms