Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ATP6V0A1Q93050 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP6V0A1Q93050 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP6V0A1Q93050 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP6V0A1Q93050 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP6V0A1Q93050 PCDH8P1-201ENST00000428983 2773 ntBASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP6V0A1Q93050 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 AC017083.2-201ENST00000608069 979 ntBASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 AC069224.1-201ENST00000566372 1715 ntBASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ATP6V0A1Q93050 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms