Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 AC004899.1-201ENST00000424687 1714 ntBASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 AL450472.2-201ENST00000603663 1156 ntBASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 CLUHP2-201ENST00000426660 1303 ntBASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
ALMS1Q8TCU4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 AC005740.2-201ENST00000511085 419 ntBASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC10.46□□□□□ -0.74
ALMS1Q8TCU4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 ACTBP8-201ENST00000403258 1108 ntBASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 AC234644.1-201ENST00000406065 370 ntBASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 MIR4649-201ENST00000582839 64 ntBASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 SLC16A6P1-201ENST00000413214 1059 ntBASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 AL139008.1-201ENST00000437894 228 ntBASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms