Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 AC027601.4-201ENST00000611259 610 ntBASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 AC091812.2-201ENST00000619081 385 ntBASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
CLHC1Q8NHS4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 MIR940-201ENST00000401276 94 ntBASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 AL135744.1-201ENST00000565098 629 ntBASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 AC106730.1-201ENST00000566722 1090 ntBASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 BX640515.1-201ENST00000617215 977 ntBASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLHC1Q8NHS4 LINC02228-204ENST00000642115 2962 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms