Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 BANF1P1-201ENST00000553684 263 ntBASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 AC009118.2-201ENST00000613275 655 ntBASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 TEX28P1-201ENST00000613479 1221 ntBASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 TEX28P2-201ENST00000617764 1221 ntBASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 HLA-A-202ENST00000376806 1854 ntBASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.61□□□□□ -0.23
CLDND2Q8NHS1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 RPL37AP1-201ENST00000412502 279 ntBASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 AC024267.1-201ENST00000582320 895 ntBASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLDND2Q8NHS1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms