Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 PI4KAP1-204ENST00000612579 1703 ntBASIC13.87□□□□□ -0.19
BEST4Q8NFU0 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BEST4Q8NFU0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 AL390755.1-201ENST00000623716 2027 ntBASIC13.86□□□□□ -0.19
BEST4Q8NFU0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.86□□□□□ -0.19
BEST4Q8NFU0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 AC087641.1-201ENST00000557561 1021 ntBASIC13.86□□□□□ -0.19
BEST4Q8NFU0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 NKAPP1-205ENST00000585790 367 ntBASIC13.86□□□□□ -0.19
BEST4Q8NFU0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 AL139288.1-201ENST00000623748 933 ntBASIC13.86□□□□□ -0.19
BEST4Q8NFU0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
BEST4Q8NFU0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 AC026396.1-201ENST00000419388 421 ntBASIC13.85□□□□□ -0.19
BEST4Q8NFU0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 AC013726.1-201ENST00000563747 2285 ntBASIC13.85□□□□□ -0.19
BEST4Q8NFU0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
BEST4Q8NFU0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms