Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 AC022188.1-201ENST00000620960 1664 ntBASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 AZGP1P1-201ENST00000411909 902 ntBASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 EEF1DP4-201ENST00000446006 880 ntBASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 CYMP-203ENST00000474680 1263 ntBASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 AC097493.3-201ENST00000509725 367 ntBASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 TEX28P1-201ENST00000613479 1221 ntBASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 TEX28P2-201ENST00000617764 1221 ntBASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 AL390754.1-201ENST00000619088 582 ntBASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT1Q8NF37 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LPCAT1Q8NF37 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LPCAT1Q8NF37 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.08■□□□□ 0.17
LPCAT1Q8NF37 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LPCAT1Q8NF37 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.08■□□□□ 0.17
LPCAT1Q8NF37 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LPCAT1Q8NF37 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LPCAT1Q8NF37 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LPCAT1Q8NF37 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.08■□□□□ 0.17
LPCAT1Q8NF37 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 SERBP1P3-201ENST00000459980 809 ntBASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 AL450472.2-201ENST00000603663 1156 ntBASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT1Q8NF37 AC007950.2-201ENST00000615045 2347 ntBASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 AP005117.1-202ENST00000581724 1908 ntBASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms