Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CFAP43Q8NDM7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CFAP43Q8NDM7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CFAP43Q8NDM7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CFAP43Q8NDM7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
CFAP43Q8NDM7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CFAP43Q8NDM7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CFAP43Q8NDM7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 HNRNPA1P32-201ENST00000396326 963 ntBASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 RNU1-114P-201ENST00000365297 166 ntBASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 AL603832.2-201ENST00000566195 2125 ntBASIC24.43■■□□□ 1.5
CFAP43Q8NDM7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 IGF1-203ENST00000392904 761 ntTSL 5 BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 AC026410.3-201ENST00000514280 936 ntBASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC24.42■■□□□ 1.5
CFAP43Q8NDM7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 AC022188.1-201ENST00000620960 1664 ntBASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CFAP43Q8NDM7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 KRTAP10-13P-201ENST00000412914 571 ntBASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 FAM197Y7-201ENST00000432892 766 ntBASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 AC112504.1-201ENST00000623415 1841 ntBASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 HOMER2P2-201ENST00000451621 847 ntBASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC24.4■■□□□ 1.5
CFAP43Q8NDM7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CFAP43Q8NDM7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC24.39■■□□□ 1.5
CFAP43Q8NDM7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC24.39■■□□□ 1.5
CFAP43Q8NDM7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms