Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 GAPDHP21-201ENST00000450301 1010 ntBASIC16.26■□□□□ 0.19
KDM1BQ8NB78 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 AC140912.1-201ENST00000577171 1054 ntBASIC16.26■□□□□ 0.19
KDM1BQ8NB78 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 AC099568.2-201ENST00000609194 695 ntBASIC16.26■□□□□ 0.19
KDM1BQ8NB78 AC004461.2-201ENST00000629517 803 ntBASIC16.26■□□□□ 0.19
KDM1BQ8NB78 AL109936.8-201ENST00000641772 604 ntBASIC16.26■□□□□ 0.19
KDM1BQ8NB78 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 AP005018.1-201ENST00000525475 301 ntBASIC16.25■□□□□ 0.19
KDM1BQ8NB78 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 AC092384.3-202ENST00000564646 2873 ntBASIC16.25■□□□□ 0.19
KDM1BQ8NB78 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
KDM1BQ8NB78 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 SPDYE19P-201ENST00000338590 713 ntBASIC16.24■□□□□ 0.19
KDM1BQ8NB78 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 HAUS4P1-201ENST00000406739 1145 ntBASIC16.24■□□□□ 0.19
KDM1BQ8NB78 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.24■□□□□ 0.19
KDM1BQ8NB78 AC055876.2-201ENST00000531834 546 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms