Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 MIR6787-201ENST00000616675 61 ntBASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPOQ8N3V7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 SOCS2P1-201ENST00000417727 557 ntBASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 RPL7P3-201ENST00000441388 714 ntBASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 CSF2RBP1-201ENST00000447905 391 ntBASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 AP000812.2-201ENST00000538934 718 ntBASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 AL359711.2-201ENST00000563105 872 ntBASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 AC009486.1-201ENST00000569860 813 ntBASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 CROCCP1-201ENST00000426910 5675 ntBASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SYNPOQ8N3V7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.14■□□□□ 0.18
SYNPOQ8N3V7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
SYNPOQ8N3V7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.14■□□□□ 0.18
SYNPOQ8N3V7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 KRT8P44-201ENST00000441609 1350 ntBASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 BRWD1P1-201ENST00000401091 371 ntBASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 AC099336.1-201ENST00000417053 1171 ntBASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 AL355864.2-201ENST00000447420 863 ntBASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 AC068587.3-201ENST00000526613 355 ntBASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 AC079316.1-201ENST00000548397 411 ntBASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPOQ8N3V7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms