Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 AP005018.1-201ENST00000525475 301 ntBASIC14.85□□□□□ -0.03
BEST3Q8N1M1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 SPDYE22P-201ENST00000582158 798 ntBASIC14.85□□□□□ -0.03
BEST3Q8N1M1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 AL132655.2-201ENST00000596276 594 ntBASIC14.85□□□□□ -0.03
BEST3Q8N1M1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 AL136982.4-201ENST00000437689 1740 ntBASIC14.85□□□□□ -0.03
BEST3Q8N1M1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
BEST3Q8N1M1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 AC007541.1-201ENST00000570282 1469 ntBASIC14.84□□□□□ -0.03
BEST3Q8N1M1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 GNAQP1-201ENST00000444815 1067 ntBASIC14.84□□□□□ -0.03
BEST3Q8N1M1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 MIR6069-201ENST00000620069 79 ntBASIC14.84□□□□□ -0.03
BEST3Q8N1M1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.84□□□□□ -0.03
BEST3Q8N1M1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.84□□□□□ -0.03
BEST3Q8N1M1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.83□□□□□ -0.03
BEST3Q8N1M1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
BEST3Q8N1M1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.83□□□□□ -0.03
BEST3Q8N1M1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
BEST3Q8N1M1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
BEST3Q8N1M1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BEST3Q8N1M1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
BEST3Q8N1M1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 AL592424.1-201ENST00000563624 1536 ntBASIC14.83□□□□□ -0.04
BEST3Q8N1M1 CYP4F24P-201ENST00000586049 1580 ntBASIC14.83□□□□□ -0.04
BEST3Q8N1M1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 AC025048.6-201ENST00000634326 1161 ntBASIC14.83□□□□□ -0.04
BEST3Q8N1M1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 ALOX12P2-203ENST00000570921 1945 ntBASIC14.83□□□□□ -0.04
BEST3Q8N1M1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BEST3Q8N1M1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms