Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 SLC25A24P2-201ENST00000415059 510 ntBASIC16.32■□□□□ 0.2
SIX5Q8N196 AC026954.1-201ENST00000429771 1293 ntBASIC16.32■□□□□ 0.2
SIX5Q8N196 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SIX5Q8N196 AC006033.1-201ENST00000440505 426 ntBASIC16.32■□□□□ 0.2
SIX5Q8N196 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.32■□□□□ 0.2
SIX5Q8N196 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.32■□□□□ 0.2
SIX5Q8N196 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.32■□□□□ 0.2
SIX5Q8N196 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.32■□□□□ 0.2
SIX5Q8N196 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SIX5Q8N196 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.32■□□□□ 0.2
SIX5Q8N196 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.32■□□□□ 0.2
SIX5Q8N196 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.32■□□□□ 0.2
SIX5Q8N196 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.32■□□□□ 0.2
SIX5Q8N196 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.32■□□□□ 0.2
SIX5Q8N196 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.32■□□□□ 0.2
SIX5Q8N196 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SIX5Q8N196 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.32■□□□□ 0.2
SIX5Q8N196 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SIX5Q8N196 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SIX5Q8N196 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.31■□□□□ 0.2
SIX5Q8N196 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SIX5Q8N196 INTS4P2-202ENST00000614726 2019 ntBASIC16.31■□□□□ 0.2
SIX5Q8N196 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
SIX5Q8N196 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SIX5Q8N196 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SIX5Q8N196 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SIX5Q8N196 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SIX5Q8N196 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SIX5Q8N196 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.31■□□□□ 0.2
SIX5Q8N196 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.31■□□□□ 0.2
SIX5Q8N196 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SIX5Q8N196 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SIX5Q8N196 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.31■□□□□ 0.2
SIX5Q8N196 RPL13P2-201ENST00000440687 659 ntBASIC16.31■□□□□ 0.2
SIX5Q8N196 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.31■□□□□ 0.2
SIX5Q8N196 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.31■□□□□ 0.2
SIX5Q8N196 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.31■□□□□ 0.2
SIX5Q8N196 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.31■□□□□ 0.2
SIX5Q8N196 AC009486.1-201ENST00000569860 813 ntBASIC16.31■□□□□ 0.2
SIX5Q8N196 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.31■□□□□ 0.2
SIX5Q8N196 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.31■□□□□ 0.2
SIX5Q8N196 AL365330.1-201ENST00000607459 531 ntBASIC16.31■□□□□ 0.2
SIX5Q8N196 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.31■□□□□ 0.2
SIX5Q8N196 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.31■□□□□ 0.2
SIX5Q8N196 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.31■□□□□ 0.2
SIX5Q8N196 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.31■□□□□ 0.2
SIX5Q8N196 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SIX5Q8N196 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.31■□□□□ 0.2
SIX5Q8N196 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 AL662844.4-201ENST00000606367 2838 ntBASIC16.31■□□□□ 0.2
SIX5Q8N196 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.31■□□□□ 0.2
SIX5Q8N196 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SIX5Q8N196 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SIX5Q8N196 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.3■□□□□ 0.2
SIX5Q8N196 HYMAI-201ENST00000635591 3347 ntBASIC16.3■□□□□ 0.2
SIX5Q8N196 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SIX5Q8N196 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SIX5Q8N196 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SIX5Q8N196 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SIX5Q8N196 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SIX5Q8N196 BAATP1-201ENST00000412284 1225 ntBASIC16.3■□□□□ 0.2
SIX5Q8N196 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms