Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 GHSR-202ENST00000427970 912 ntBASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 HIST2H2BB-201ENST00000449108 381 ntBASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 AC013355.1-201ENST00000562625 723 ntBASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 AC012313.1-201ENST00000593393 3059 ntBASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 CD8B2-202ENST00000417670 633 ntBASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 UPF3AP2-201ENST00000457924 1132 ntBASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 AC138649.2-201ENST00000615886 705 ntBASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 AC091812.3-201ENST00000621362 345 ntBASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL27A1Q8IZC6 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 AC104982.3-201ENST00000581995 514 ntBASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 AC004466.1-201ENST00000599515 1080 ntBASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.64□□□□□ -0.07
COL27A1Q8IZC6 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms