Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 AC055876.2-201ENST00000531834 546 ntBASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 AL450472.2-201ENST00000603663 1156 ntBASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 AC239800.4-201ENST00000603712 296 ntBASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 AL358472.5-202ENST00000641448 1267 ntBASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 AC006449.5-201ENST00000610658 2098 ntBASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.79■□□□□ 0.28
SCN4BQ8IWT1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 SLC7A15P-201ENST00000424028 1363 ntBASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 Z97205.2-201ENST00000564697 1639 ntBASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 AP003680.1-201ENST00000598970 3660 ntBASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 TARDBPP1-201ENST00000442013 1203 ntBASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 AL596325.1-201ENST00000563991 1082 ntBASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 AC008494.3-201ENST00000606615 944 ntBASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 AC007431.3-201ENST00000623221 587 ntBASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCN4BQ8IWT1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms