Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 AC092552.1-201ENST00000547243 906 ntBASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC60Q8IWA6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 AC010491.1-201ENST00000563101 2797 ntBASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 AL512384.1-201ENST00000406683 331 ntBASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 RN7SL837P-201ENST00000463010 287 ntBASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC60Q8IWA6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 FAM86LP-201ENST00000478302 853 ntBASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 AC104596.2-201ENST00000512793 793 ntBASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC60Q8IWA6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms